Optical densities of PCR products from amplification reactions for H pylori ureC and cagA genes using as template DNA extracted from stomach, trachea, and lung from cases of SIDS and controls
Case no. | Age at death (wk) | Cause of death | H pylori ureC gene | H pylori cagA gene | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Stomach | Trachea | Lung | Stomach | Trachea | Lung | |||||
T1 | 2 | SIDS | 0.265 | 0.310* | NT | 0.444* | 0.363* | NT | ||
T2 | 3 | SIDS | 0.474* | 0.340* | 0.163 | 0.099 | 0.107 | 0.107 | ||
T3 | 4 | SIDS | 0.297 | NT | 0.575* | 0.404 | NT | 0.434* | ||
T4 | 4 | SIDS | NT | 0.302* | 0.278 | NT | 0.222 | 0.239 | ||
T5 | 5 | SIDS | 0.355* | 0.278 | 0.321* | 0.537* | 0.427* | 0.477* | ||
T6 | 6 | SIDS | 0.268 | 0.125 | 0.213 | 0.368 | 0.109 | 0.429* | ||
T7 | 7 | SIDS | 0.132 | 0.374* | 0.163 | 0.410 | 0.247 | 0.369* | ||
T8 | 7 | SIDS | 0.124 | 0.112 | 0.113 | 0.088 | 0.099 | 0.120 | ||
T9 | 8 | SIDS | 0.236 | 0.240 | NT | 0.583* | 0.294* | NT | ||
T10 | 8 | SIDS | 1.020* | 0.483* | 1.040* | 0.497* | 0.417* | 0.496* | ||
T11 | 8 | SIDS | 0.270 | 0.336* | 0.406* | 0.365 | 0.369* | 0.280 | ||
T12 | 8 | SIDS | 0.406* | 0.270 | 0.310* | 0.570* | 0.576* | 0.375* | ||
T13 | 8 | SIDS | 2.231* | 2.918* | 0.249 | 0.117 | 0.360* | 0.102 | ||
T14 | 9 | SIDS | 0.470* | 0.417* | 0.500* | 0.541* | 0.431* | 0.525* | ||
T15 | 10 | SIDS | 0.282 | NT | 0.137 | 0.104 | NT | 0.096 | ||
T16 | 10 | SIDS | 0.319* | 0.243 | 0.260 | 0.181 | 0.260 | 0.255 | ||
T17 | 11 | SIDS | 1.040* | 0.500* | 0.464* | 0.496* | 0.496* | 0.488* | ||
T18 | 12 | SIDS | 0.317* | 0.299* | 0.220 | 0.506* | 0.378* | 0.364* | ||
T19 | 12 | SIDS | 0.179 | 0.147 | 0.130 | 0.106 | 0.102 | 0.102 | ||
T20 | 13 | SIDS | 0.286 | 2.570* | 2.827* | 0.709* | 1.922* | 0.389* | ||
T21 | 14 | SIDS | 0.127 | 0.155 | 0.190 | 0.105 | 0.113 | 0.097 | ||
T22 | 15 | SIDS | 0.336* | 0.248 | 0.220 | 0.333 | 0.442* | 0.352* | ||
T23 | 16 | SIDS | NT | 0.240 | 0.373* | NT | 0.364* | 0.348* | ||
T24 | 16 | SIDS | 0.358* | 0.295* | 0.437* | 0.306 | 0.304* | 0.852* | ||
T25 | 16 | SIDS | 0.490* | 0.516* | 0.485* | 0.484* | 0.286 | 0.441* | ||
T26 | 19 | SIDS | 0.285 | 0.209 | 0.225 | 0.426* | 0.472* | 0.386* | ||
T27 | 19 | SIDS | 0.267 | 0.302* | 0.390* | 0.287 | 0.253 | 0.379* | ||
T28 | 21 | SIDS | 0.375* | 0.310* | 0.331* | 0.401 | 0.431* | 0.436* | ||
T29 | 24 | SIDS | 0.375* | 0.331* | 0.248 | 0.332 | 0.433* | 0.338* | ||
T30 | 24 | SIDS | 0.233 | 0.319* | 0.406* | 0.435* | 0.518* | 0.652* | ||
T31 | 28 | SIDS | 0.292 | 0.293* | 0.327* | 0.420* | 0.504* | 0.432* | ||
T32 | 28 | SIDS | 0.304* | 0.307* | 0.321* | 0.333 | 0.331* | 0.263 | ||
C1 | 3 | Prematurity | 0.100 | 0.150 | 0.180 | 0.120 | 0.130 | 0.090 | ||
C2 | 4 | Prematurity | NT | 0.200 | 0.090 | NT | 0.120 | 0.100 | ||
C3 | 7 | Ileal perforation | 0.265 | 0.298* | 0.283 | 0.414* | 0.303* | 0.317 | ||
C4 | 7 | Necrotising enterocolitis | 0.200 | 0.150 | 0.180 | 0.120 | 0.200 | 0.150 | ||
C5 | 20 | E colisepticaemia | 0.170 | 0.160 | 0.177 | 0.150 | 0.120 | 0.160 | ||
C6 | 24 | Suffocation | 0.210 | 0.080 | NT | 0.150 | 0.090 | NT | ||
C7 | 32 | Pneumonia | NT | 0.130 | 0.180 | NT | 0.150 | 0.180 | ||
C8 | 44 | Pneumococcal septicaemia | 0.100 | 0.140 | NT | 0.120 | 0.090 | NT | ||
Mean (SD) | 0.174 | 0.163 | 0.181 | 0.179 | 0.150 | 0.166 | ||||
(0.065) | (0.063) | (0.060) | (0.116) | (0.071) | (0.080) |
Those specimens with a cut off value greater than or equal to the mean plus two times the standard deviation of the negative controls are marked with an asterisk.
SIDS, sudden infant death syndrome; T1, test case number 1; C1, control case number 1; NT, not tested.